Burkholderia cenocepacia J2315, BCAL1480 (relA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0015969 | guanosine tetraphosphate metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:SM00954
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG (InterPro) | 00970 | Aminoacyl-tRNA biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
|
| KEGG | bcj00230 | Purine metabolism | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81271 | IPR012676 | TGS-like | 383 | 451 | 2.18E-18 | |
| TIGRFAM | TIGR00691 | spoT_relA: RelA/SpoT family protein | IPR004811 | RelA/SpoT family | 15 | 721 | 5.4E-172 |
| Pfam | PF04607 | Region found in RelA / SpoT proteins | IPR007685 | RelA/SpoT | 227 | 336 | 6.5E-38 |
| Coils | Coil | 727 | 727 | - | |||
| CDD | cd04876 | ACT_RelA-SpoT | 656 | 725 | 1.32332E-17 | ||
| CDD | cd01668 | TGS_RSH | IPR033655 | RelA, TGS domain | 394 | 451 | 6.75133E-29 |
| Gene3D | G3DSA:3.10.20.30 | IPR012675 | Beta-grasp domain superfamily | 387 | 457 | 1.4E-26 | |
| Pfam | PF02824 | TGS domain | IPR004095 | TGS | 393 | 451 | 1.4E-19 |
| SMART | SM00954 | IPR007685 | RelA/SpoT | 227 | 337 | 7.1E-68 | |
| ProSiteProfiles | PS51671 | ACT domain profile. | IPR002912 | ACT domain | 655 | 725 | 12.765 |
| Gene3D | G3DSA:3.30.70.260 | 650 | 727 | 3.7E-17 | |||
| CDD | cd05399 | NT_Rel-Spo_like | IPR007685 | RelA/SpoT | 207 | 325 | 2.09549E-41 |
| Gene3D | G3DSA:1.10.3210.10 | 1 | 182 | 2.9E-38 | |||
| SUPERFAMILY | SSF109604 | 3 | 181 | 1.1E-40 | |||
| SUPERFAMILY | SSF55021 | 650 | 723 | 6.87E-15 | |||
| Pfam | PF13291 | ACT domain | IPR002912 | ACT domain | 650 | 725 | 9.7E-18 |
| Gene3D | G3DSA:3.30.460.10 | 185 | 317 | 1.7E-51 | |||
| MobiDBLite | mobidb-lite | consensus disorder prediction | 546 | 569 | - | ||
| SUPERFAMILY | SSF81301 | 184 | 364 | 2.45E-63 | |||
| Pfam | PF13328 | HD domain | IPR003607 | HD/PDEase domain | 3 | 168 | 7.8E-48 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.