Burkholderia cenocepacia J2315, BCAL1359
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF69255 | 379 | 486 | 2.38E-17 | |||
| Pfam | PF13296 | Putative type VI secretion system Rhs element Vgr | IPR028244 | Putative type VI secretion system, Rhs element associated Vgr domain | 518 | 623 | 7.5E-29 |
| Gene3D | G3DSA:3.55.50.10 | 103 | 198 | 8.2E-66 | |||
| Gene3D | G3DSA:2.30.110.50 | 24 | 340 | 8.2E-66 | |||
| TIGRFAM | TIGR01646 | vgr_GE: Rhs element Vgr protein | IPR006533 | Type VI secretion system, RhsGE-associated Vgr protein | 28 | 414 | 1.0E-41 |
| TIGRFAM | TIGR03361 | VI_Rhs_Vgr: type VI secretion system Vgr family protein | IPR017847 | Type VI secretion system, RhsGE-associated Vgr family subset | 21 | 414 | 1.6E-57 |
| SUPERFAMILY | SSF69279 | 17 | 196 | 7.94E-44 | |||
| MobiDBLite | mobidb-lite | consensus disorder prediction | 888 | 931 | - | ||
| MobiDBLite | mobidb-lite | consensus disorder prediction | 652 | 674 | - | ||
| Pfam | PF10106 | Uncharacterized protein conserved in bacteria (DUF2345) | IPR018769 | Domain of unknown function DUF2345, Vgr C-terminal | 672 | 819 | 3.8E-44 |
| SUPERFAMILY | SSF69279 | 220 | 379 | 4.42E-10 | |||
| Gene3D | G3DSA:2.40.50.230 | IPR037026 | Vgr protein, OB-fold domain superfamily | 373 | 491 | 2.8E-26 | |
| Gene3D | G3DSA:3.30.1920.30 | 232 | 298 | 8.2E-66 | |||
| Pfam | PF05954 | Phage late control gene D protein (GPD) | 35 | 341 | 4.0E-70 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.