Burkholderia cenocepacia J2315, BCAL1077

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 224 307 2.6E-24
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 230 308 1.8E-17
Pfam PF12852 Cupin IPR032783 AraC-type transcription regulator, ligand-binding domain 4 192 5.9E-38
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 260 312 1.18E-10
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 211 309 23.469
Gene3D G3DSA:1.10.10.60 204 313 1.1E-23
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 207 257 1.7E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.