Burkholderia cenocepacia J2315, BCAL1059 (argD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006520 cellular amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03246
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00600
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008483 transaminase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00600
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.640.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006525 arginine metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01107
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj01210 2-Oxocarboxylic acid metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00330 Arginine and proline metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00300 Lysine biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01110 Biosynthesis of secondary metabolites 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01130 Biosynthesis of antibiotics 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01120 Microbial metabolism in diverse environments 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01230 Biosynthesis of amino acids 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00610 OAT_like IPR005814 Aminotransferase class-III 1 385 2.75142E-151
Gene3D G3DSA:3.40.640.10 IPR015421 Pyridoxal phosphate-dependent transferase, major domain 45 290 3.2E-148
TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family IPR004636 Acetylornithine/Succinylornithine transaminase family 2 385 2.3E-145
TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family IPR017652 Acetyl/Succinylornithine transaminase family, bacteria 1 388 3.9E-208
ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. IPR005814 Aminotransferase class-III 208 245 -
Gene3D G3DSA:3.90.1150.10 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 10 378 3.2E-148
PIRSF PIRSF000521 IPR005814 Aminotransferase class-III 158 388 1.4E-37
PIRSF PIRSF000521 IPR005814 Aminotransferase class-III 9 142 1.8E-8
Pfam PF00202 Aminotransferase class-III IPR005814 Aminotransferase class-III 9 385 3.4E-121
Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. IPR004636 Acetylornithine/Succinylornithine transaminase family 1 388 68.594
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 2 386 7.48E-123

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.