Burkholderia cenocepacia J2315, BCAL0880 (aspS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01042
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01336
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01042
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006418 tRNA aminoacylation for protein translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01042
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.1360.30
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00044
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016874 ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00044
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj00970 Aminoacyl-tRNA biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.1360.30 IPR004115 GAD-like domain superfamily 275 429 2.4E-196
TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase IPR004524 Aspartate-tRNA ligase, type 1 3 591 1.9E-244
Pfam PF02938 GAD domain IPR029351 GAD domain 311 410 6.6E-26
ProSiteProfiles PS50862 Aminoacyl-transfer RNA synthetases class-II family profile. IPR006195 Aminoacyl-tRNA synthetase, class II 141 564 19.221
CDD cd00777 AspRS_core 141 568 1.69087E-165
Pfam PF00152 tRNA synthetases class II (D, K and N) IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) 121 567 5.2E-107
CDD cd04317 EcAspRS_like_N 4 137 2.1029E-68
PRINTS PR01042 Aspartyl-tRNA synthetase signature IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb 483 499 1.3E-26
SUPERFAMILY SSF55681 113 594 1.19E-104
PRINTS PR01042 Aspartyl-tRNA synthetase signature IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb 210 223 1.3E-26
Pfam PF01336 OB-fold nucleic acid binding domain IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type 20 103 3.2E-17
PRINTS PR01042 Aspartyl-tRNA synthetase signature IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb 527 541 1.3E-26
SUPERFAMILY SSF50249 IPR012340 Nucleic acid-binding, OB-fold 3 107 7.81E-33
PRINTS PR01042 Aspartyl-tRNA synthetase signature IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb 193 205 1.3E-26
Gene3D G3DSA:3.30.930.10 120 591 2.4E-196
SUPERFAMILY SSF55261 IPR004115 GAD-like domain superfamily 294 419 1.8E-42
Gene3D G3DSA:2.40.50.140 1 107 2.8E-34
Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. IPR004524 Aspartate-tRNA ligase, type 1 3 593 33.363

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.