Burkholderia cenocepacia J2315, BCAL0806 (mutY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF55811
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0019104 DNA N-glycosylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01084
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006284 base-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00056
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00633
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03410 Base excision repair 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF14815 NUDIX domain IPR029119 MutY, C-terminal 252 362 3.7E-25
Gene3D G3DSA:1.10.340.30 35 146 5.1E-86
CDD cd03431 DNA_Glycosylase_C IPR029119 MutY, C-terminal 249 363 9.16839E-24
Gene3D G3DSA:1.10.1670.10 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal 23 229 5.1E-86
CDD cd00056 ENDO3c IPR003265 HhH-GPD domain 45 206 2.48986E-49
SUPERFAMILY SSF48150 IPR011257 DNA glycosylase 17 242 2.83E-72
Pfam PF00633 Helix-hairpin-helix motif IPR000445 Helix-hairpin-helix motif 114 142 2.7E-8
SMART SM00478 IPR003265 HhH-GPD domain 53 208 4.5E-46
Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein IPR003265 HhH-GPD domain 50 181 9.5E-20
TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase IPR005760 A/G-specific adenine glycosylase MutY 20 291 7.3E-105
ProSitePatterns PS01155 Endonuclease III family signature. IPR004036 Endonuclease III-like, conserved site-2 116 145 -
SUPERFAMILY SSF55811 IPR015797 NUDIX hydrolase-like domain superfamily 238 363 5.34E-27
Gene3D G3DSA:3.90.79.10 243 365 5.0E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.