Burkholderia cenocepacia J2315, BCAL0485 (gatB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016874 | ligase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF02934
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF55931
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00121
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | bcj00970 | Aminoacyl-tRNA biosynthesis | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj01100 | Metabolic pathways | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| TIGRFAM | TIGR00133 | gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit | IPR004413 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit | 3 | 490 | 7.5E-171 |
| SUPERFAMILY | SSF89095 | IPR003789 | Aspartyl/glutamyl-tRNA amidotransferase subunit B-like | 306 | 411 | 4.84E-33 | |
| SUPERFAMILY | SSF55931 | IPR014746 | Glutamine synthetase/guanido kinase, catalytic domain | 6 | 305 | 3.07E-119 | |
| SMART | SM00845 | IPR018027 | Asn/Gln amidotransferase | 337 | 490 | 7.5E-81 | |
| Pfam | PF02934 | GatB/GatE catalytic domain | IPR006075 | Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic | 7 | 298 | 2.4E-112 |
| Gene3D | G3DSA:1.10.150.380 | IPR042114 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 | 306 | 429 | 4.7E-33 | |
| Hamap | MF_00121 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. | IPR004413 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit | 4 | 491 | 38.736 |
| Pfam | PF02637 | GatB domain | IPR018027 | Asn/Gln amidotransferase | 338 | 490 | 5.5E-52 |
| Gene3D | G3DSA:1.10.10.410 | IPR023168 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 | 430 | 491 | 8.7E-28 | |
| ProSitePatterns | PS01234 | Glutamyl-tRNA(Gln) amidotransferase subunit B signature. | IPR017958 | Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site | 153 | 167 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.