Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PS50931
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PS50931
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 28 | 38 | 1.5E-7 |
ProSiteProfiles | PS50931 | LysR-type HTH domain profile. | IPR000847 | Transcription regulator HTH, LysR | 1 | 57 | 27.727 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 88 | 282 | 2.1E-40 |
SUPERFAMILY | SSF53850 | 89 | 283 | 5.23E-40 | |||
TIGRFAM | TIGR03339 | phn_lysR: aminoethylphosphonate catabolism associated LysR family transcriptional regulator | IPR017724 | Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type | 4 | 282 | 4.7E-126 |
Gene3D | G3DSA:3.40.190.290 | 89 | 285 | 2.6E-41 | |||
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 82 | 1.5E-20 | |
SUPERFAMILY | SSF46785 | IPR036390 | Winged helix DNA-binding domain superfamily | 3 | 102 | 1.13E-19 | |
CDD | cd05466 | PBP2_LTTR_substrate | 91 | 282 | 4.43901E-44 | ||
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 17 | 28 | 1.5E-7 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 2 | 60 | 7.2E-20 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 38 | 49 | 1.5E-7 |