Burkholderia cenocepacia J2315, BCAL0438

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006281	DNA repair	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF48150	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003824	catalytic activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF48150	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006284	base-excision repair	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00478	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bcj03410	Base excision repair	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.30.310.20		IPR037046	DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily	22	140	5.8E-31
SMART	SM01009		IPR010316	DNA-3-methyladenine glycosylase AlkA, N-terminal	22	140	1.9E-47
SUPERFAMILY	SSF55945				23	121	3.45E-26
Gene3D	G3DSA:1.10.340.30				141	259	2.0E-33
SMART	SM00478		IPR003265	HhH-GPD domain	150	310	6.5E-10
CDD	cd00056	ENDO3c	IPR003265	HhH-GPD domain	142	306	5.54108E-20
Gene3D	G3DSA:1.10.1670.10		IPR023170	Helix-turn-helix, base-excision DNA repair, C-terminal	260	313	2.7E-8
Pfam	PF06029	AlkA N-terminal domain	IPR010316	DNA-3-methyladenine glycosylase AlkA, N-terminal	23	140	6.7E-32
Pfam	PF00730	HhH-GPD superfamily base excision DNA repair protein	IPR003265	HhH-GPD domain	146	295	3.7E-8
SUPERFAMILY	SSF48150		IPR011257	DNA glycosylase	130	306	1.92E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.