Burkholderia cenocepacia J2315, BCAL0343 (tssD)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	18316384	Reviewed by curator
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IGC Inferred from Genomic Context	ECO:0000177 genomic context evidence	20729192	Reviewed by curator

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bcj03070	Bacterial secretion system	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF141452		IPR036624	Hcp1-like superfamily	1	162	9.15E-45
Pfam	PF05638	Type VI secretion system effector, Hcp	IPR008514	Type VI secretion system effector, Hcp	10	138	5.4E-38
TIGRFAM	TIGR03344	VI_effect_Hcp1: type VI secretion system effector, Hcp1 family	IPR008514	Type VI secretion system effector, Hcp	15	147	9.7E-24
Gene3D	G3DSA:2.30.110.20		IPR036624	Hcp1-like superfamily	1	167	2.2E-56

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.