Burkholderia pseudomallei 1710b, BURPS1710b_0220 (gspD)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0015628	protein secretion by the type II secretion system	IGC Inferred from Genomic Context	ECO:0000177 genomic context evidence
Cellular Component	GO:0015627	type II protein secretion system complex	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02517	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009306	protein secretion	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00263	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0015628	protein secretion by the type II secretion system	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02517	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0019867	outer membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02517	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bpm03070	Bacterial secretion system	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF03958	Bacterial type II/III secretion system short domain	IPR005644	NolW-like	122	180	1.4E-11
Pfam	PF03958	Bacterial type II/III secretion system short domain	IPR005644	NolW-like	261	399	1.1E-18
PRINTS	PR00811	Bacterial general secretion pathway protein D signature	IPR001775	GspD/PilQ family	521	531	4.9E-29
MobiDBLite	mobidb-lite	consensus disorder prediction			702	750	-
Pfam	PF03958	Bacterial type II/III secretion system short domain	IPR005644	NolW-like	185	255	8.7E-14
PRINTS	PR00811	Bacterial general secretion pathway protein D signature	IPR001775	GspD/PilQ family	486	510	4.9E-29
PRINTS	PR00811	Bacterial general secretion pathway protein D signature	IPR001775	GspD/PilQ family	624	642	4.9E-29
Pfam	PF00263	Bacterial type II and III secretion system protein	IPR004846	Type II/III secretion system	494	659	4.9E-51
TIGRFAM	TIGR02517	type_II_gspD: type II secretion system protein D	IPR013356	Type II secretion system GspD	25	669	1.4E-218
Gene3D	G3DSA:3.30.1370.120		IPR038591	NolW-like superfamily	15	180	1.2E-60
PRINTS	PR00811	Bacterial general secretion pathway protein D signature	IPR001775	GspD/PilQ family	399	409	4.9E-29
PRINTS	PR00811	Bacterial general secretion pathway protein D signature	IPR001775	GspD/PilQ family	647	661	4.9E-29
MobiDBLite	mobidb-lite	consensus disorder prediction			305	333	-
Gene3D	G3DSA:3.30.1370.120		IPR038591	NolW-like superfamily	182	255	5.2E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.