Burkholderia pseudomallei 1106a, BURPS1106A_A2058 (bprC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00041
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00041
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00041
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00041
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00041
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00041
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 291 306 3.4E-6
Gene3D G3DSA:1.10.10.60 219 327 4.6E-27
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 244 323 1.2E-18
Pfam PF14525 AraC-binding-like domain IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like 30 204 6.7E-18
ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. IPR018062 HTH domain AraC-type, conserved site 274 318 -
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 238 322 2.7E-25
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 274 325 2.12E-10
Coils Coil 330 330 -
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 224 324 26.346
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 306 322 3.4E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.