Burkholderia multivorans ATCC 17616, Bmul_2557 (ldhR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:1900192 positive regulation of single-species biofilm formation
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
28733286 Reviewed by curator
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 4 87 4.22E-21
Pfam PF03466 LysR substrate binding domain IPR005119 LysR, substrate-binding 89 297 6.7E-44
Gene3D G3DSA:3.40.190.10 165 267 3.0E-54
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 2 89 3.5E-26
CDD cd08422 PBP2_CrgA_like 92 292 2.08765E-64
Gene3D G3DSA:3.40.190.10 92 294 3.0E-54
Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 Transcription regulator HTH, LysR 5 62 1.2E-18
ProSiteProfiles PS50931 LysR-type HTH domain profile. IPR000847 Transcription regulator HTH, LysR 1 59 24.938
Coils Coil 69 89 -
SUPERFAMILY SSF53850 87 300 1.03E-43

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.