Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006352 | DNA-templated transcription, initiation |
Inferred from Sequence Model
Term mapped from: InterPro:SSF88946
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016987 | sigma factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006352 | DNA-templated transcription, initiation |
Inferred from Sequence Model
Term mapped from: InterPro:SSF88946
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF88946
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016987 | sigma factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF88946
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:SSF88946
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:SSF88946
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF08281 | Sigma-70, region 4 | IPR013249 | RNA polymerase sigma factor 70, region 4 type 2 | 108 | 159 | 1.4E-12 |
Pfam | PF04542 | Sigma-70 region 2 | IPR007627 | RNA polymerase sigma-70 region 2 | 9 | 72 | 1.6E-15 |
SUPERFAMILY | SSF54427 | IPR032710 | NTF2-like domain superfamily | 171 | 290 | 2.17E-16 | |
TIGRFAM | TIGR02937 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family | IPR014284 | RNA polymerase sigma-70 like domain | 9 | 161 | 2.4E-18 |
SUPERFAMILY | SSF88946 | IPR013325 | RNA polymerase sigma factor, region 2 | 8 | 87 | 5.89E-15 | |
SUPERFAMILY | SSF88659 | IPR013324 | RNA polymerase sigma factor, region 3/4-like | 106 | 161 | 2.99E-11 | |
Gene3D | G3DSA:1.10.1740.10 | 6 | 70 | 1.3E-9 | |||
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 104 | 165 | 4.0E-11 | |
TIGRFAM | TIGR02957 | SigX4: RNA polymerase sigma-70 factor, TIGR02957 family | IPR014303 | RNA polymerase sigma-70, ECF type | 8 | 288 | 1.3E-117 |