Burkholderia thailandensis E264 ATCC 700388, BTH_II1893 (vgrG-4b)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0033103 protein secretion by the type VI secretion system
TAS
Traceable Author Statement 		ECO:0000304
traceable author statement used in manual assertion		 20865170 Reviewed by curator
Biological Process GO:0033103 protein secretion by the type VI secretion system
IGC
Inferred from Genomic Context 		ECO:0000177
genomic context evidence

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bte03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05954 Phage late control gene D protein (GPD) 23 327 1.8E-78
Gene3D G3DSA:3.30.1920.30 221 284 2.4E-94
TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 5 519 1.5E-154
SUPERFAMILY SSF69279 6 178 3.87E-51
SUPERFAMILY SSF69255 360 447 3.14E-29
Gene3D G3DSA:2.40.50.230 IPR037026 Vgr protein, OB-fold domain superfamily 351 453 1.7E-39
MobiDBLite mobidb-lite consensus disorder prediction 681 725 -
Gene3D G3DSA:3.55.50.10 92 183 2.4E-94
Gene3D G3DSA:2.30.110.50 11 327 2.4E-94
SUPERFAMILY SSF69349 438 533 6.98E-15
SUPERFAMILY SSF69279 192 360 1.48E-34
TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 16 503 2.5E-157

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.