Burkholderia thailandensis E264 ATCC 700388, BTH_II1886 (tssL-4)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0033103 protein secretion by the type VI secretion system
TAS
Traceable Author Statement
ECO:0000304
traceable author statement used in manual assertion
20865170 Reviewed by curator
Biological Process GO:0033103 protein secretion by the type VI secretion system
IGC
Inferred from Genomic Context
ECO:0000177
genomic context evidence

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bte03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family IPR017732 Type IV / VI secretion system, DotU 136 340 2.9E-49
SUPERFAMILY SSF103088 IPR036737 OmpA-like domain superfamily 382 508 3.14E-20
Gene3D G3DSA:1.25.40.590 IPR038522 Type IV / VI secretion system, DotU superfamily 134 290 1.1E-30
MobiDBLite mobidb-lite consensus disorder prediction 570 584 -
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 395 506 1.27971E-22
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 395 502 2.5E-9
Pfam PF09850 Type VI secretion system protein DotU IPR017732 Type IV / VI secretion system, DotU 141 335 4.1E-40
MobiDBLite mobidb-lite consensus disorder prediction 560 594 -
ProSiteProfiles PS51123 OmpA-like domain profile. IPR006665 OmpA-like domain 383 512 33.388
Gene3D G3DSA:3.30.1330.60 IPR036737 OmpA-like domain superfamily 357 510 4.6E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.