Burkholderia thailandensis E264 ATCC 700388, BTH_II1681 (thaA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00196
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 190 206 7.0E-5
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 180 230 8.3E-14
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 180 230 1.2601E-14
ProSiteProfiles PS50043 LuxR-type HTH domain profile. IPR000792 Transcription regulator LuxR, C-terminal 169 234 19.092
SUPERFAMILY SSF46894 IPR016032 Signal transduction response regulator, C-terminal effector 161 236 4.08E-14
Gene3D G3DSA:3.30.450.80 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily 4 66 5.1E-10
Gene3D G3DSA:3.30.450.80 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily 86 168 2.3E-15
ProSitePatterns PS00622 LuxR-type HTH domain signature. IPR000792 Transcription regulator LuxR, C-terminal 190 217 -
Pfam PF03472 Autoinducer binding domain IPR005143 Transcription factor LuxR-like, autoinducer-binding domain 95 159 1.7E-6
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 206 218 7.0E-5
SUPERFAMILY SSF75516 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily 99 164 4.45E-10
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 176 190 7.0E-5
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 170 236 3.9E-20
SMART SM00421 IPR000792 Transcription regulator LuxR, C-terminal 173 230 2.8E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.