Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0033103 | protein secretion by the type VI secretion system | Inferred from Genomic Context | ECO:0000177 genomic context evidence |
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Biological Process | GO:0033103 | protein secretion by the type VI secretion system | Traceable Author Statement | ECO:0000304 traceable author statement used in manual assertion |
20865170 | Reviewed by curator |
Biological Process | GO:0019538 | protein metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.1780.10
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:PS00870
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | bte03070 | Bacterial secretion system | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF07724 | AAA domain (Cdc48 subfamily) | IPR003959 | ATPase, AAA-type, core | 613 | 779 | 1.4E-37 |
SMART | SM01086 | IPR019489 | Clp ATPase, C-terminal | 785 | 877 | 4.0E-14 | |
SMART | SM00382 | IPR003593 | AAA+ ATPase domain | 222 | 367 | 1.2E-8 | |
PRINTS | PR00300 | ATP-dependent Clp protease ATP-binding subunit signature | IPR001270 | ClpA/B family | 662 | 680 | 1.0E-31 |
Gene3D | G3DSA:1.10.8.60 | 785 | 883 | 4.8E-12 | |||
CDD | cd00009 | AAA | 597 | 740 | 3.25715E-16 | ||
SUPERFAMILY | SSF81923 | IPR036628 | Clp, N-terminal domain superfamily | 13 | 127 | 4.12E-17 | |
Gene3D | G3DSA:3.40.50.300 | 175 | 366 | 2.6E-61 | |||
SUPERFAMILY | SSF52540 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 562 | 878 | 6.33E-65 | |
Pfam | PF17871 | AAA lid domain | IPR041546 | ClpA/ClpB, AAA lid domain | 369 | 456 | 1.0E-28 |
Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | IPR003959 | ATPase, AAA-type, core | 227 | 328 | 7.0E-9 |
PRINTS | PR00300 | ATP-dependent Clp protease ATP-binding subunit signature | IPR001270 | ClpA/B family | 691 | 709 | 1.0E-31 |
SMART | SM00382 | IPR003593 | AAA+ ATPase domain | 613 | 773 | 4.6E-11 | |
TIGRFAM | TIGR03345 | VI_ClpV1: type VI secretion ATPase, ClpV1 family | IPR017729 | Type VI secretion system, ATPase ClpV1 | 14 | 869 | 0.0 |
Coils | Coil | 519 | 539 | - | |||
Gene3D | G3DSA:1.10.1780.10 | IPR036628 | Clp, N-terminal domain superfamily | 1 | 160 | 6.2E-40 | |
Pfam | PF10431 | C-terminal, D2-small domain, of ClpB protein | IPR019489 | Clp ATPase, C-terminal | 785 | 859 | 4.5E-12 |
Gene3D | G3DSA:3.40.50.300 | 566 | 783 | 1.7E-64 | |||
Gene3D | G3DSA:3.40.50.300 | 368 | 560 | 2.2E-45 | |||
PRINTS | PR00300 | ATP-dependent Clp protease ATP-binding subunit signature | IPR001270 | ClpA/B family | 724 | 738 | 1.0E-31 |
Coils | Coil | 436 | 456 | - | |||
ProSitePatterns | PS00870 | Chaperonins clpA/B signature 1. | IPR018368 | ClpA/B, conserved site 1 | 318 | 330 | - |
CDD | cd00009 | AAA | 205 | 360 | 1.3269E-16 | ||
SUPERFAMILY | SSF52540 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 184 | 505 | 2.88E-70 | |
PRINTS | PR00300 | ATP-dependent Clp protease ATP-binding subunit signature | IPR001270 | ClpA/B family | 617 | 635 | 1.0E-31 |