Burkholderia pseudomallei K96243, BPSS2056
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | bps03070 | Bacterial secretion system | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.40.50.230 | IPR037026 | Vgr protein, OB-fold domain superfamily | 350 | 452 | 1.7E-44 | |
| SUPERFAMILY | SSF69279 | 182 | 359 | 3.06E-40 | |||
| SUPERFAMILY | SSF69349 | 437 | 633 | 4.47E-51 | |||
| SUPERFAMILY | SSF69349 | 619 | 705 | 7.38E-6 | |||
| Pfam | PF05954 | Phage late control gene D protein (GPD) | 25 | 325 | 5.1E-99 | ||
| TIGRFAM | TIGR01646 | vgr_GE: Rhs element Vgr protein | IPR006533 | Type VI secretion system, RhsGE-associated Vgr protein | 19 | 501 | 2.0E-140 |
| Gene3D | G3DSA:3.55.50.10 | 93 | 183 | 1.0E-111 | |||
| Gene3D | G3DSA:3.30.1920.30 | 219 | 281 | 1.0E-111 | |||
| Gene3D | G3DSA:2.30.110.50 | 9 | 327 | 1.0E-111 | |||
| SUPERFAMILY | SSF69255 | 359 | 447 | 1.8E-32 | |||
| TIGRFAM | TIGR03361 | VI_Rhs_Vgr: type VI secretion system Vgr family protein | IPR017847 | Type VI secretion system, RhsGE-associated Vgr family subset | 10 | 519 | 1.6E-191 |
| SUPERFAMILY | SSF69279 | 7 | 178 | 4.68E-53 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.