Burkholderia pseudomallei K96243, BPSS1824

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF51182 IPR011051 RmlC-like cupin domain superfamily 23 197 1.19E-7
Gene3D G3DSA:1.10.10.60 152 255 1.2E-28
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 168 251 4.2E-26
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 155 253 28.069
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 155 202 6.27E-10
Gene3D G3DSA:2.60.120.10 IPR014710 RmlC-like jelly roll fold 9 78 2.5E-6
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 174 252 1.5E-21
ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. IPR018062 HTH domain AraC-type, conserved site 205 247 -
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 220 235 3.2E-6
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 204 253 5.38E-12
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 235 251 3.2E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.