Burkholderia pseudomallei K96243, BPSS0532 (tssM-4)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0033103 | protein secretion by the type VI secretion system | Traceable Author Statement | ECO:0000304 traceable author statement used in manual assertion |
17660433 | Reviewed by curator |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | bps03070 | Bacterial secretion system | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF14331 | ImcF-related N-terminal domain | IPR025743 | IcmF-related, N-terminal domain | 192 | 384 | 3.6E-28 |
| TIGRFAM | TIGR03348 | VI_IcmF: type VI secretion protein IcmF | IPR017731 | Type VI secretion system, IcmF | 7 | 1167 | 0.0 |
| Pfam | PF06744 | Type VI secretion protein IcmF C-terminal | IPR010623 | Type VI secretion system IcmF, C-terminal | 917 | 1116 | 6.8E-44 |
| Coils | Coil | 227 | 247 | - | |||
| Pfam | PF06761 | Intracellular multiplication and human macrophage-killing | IPR009612 | IcmF-related | 495 | 798 | 2.5E-63 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.