Burkholderia pseudomallei K96243, BPSS0281 (gabT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.1150.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00202
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008483 transaminase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00202
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009448 gamma-aminobutyric acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00700
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003867 4-aminobutyrate transaminase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00700
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps00640 Propanoate metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps00250 Alanine, aspartate and glutamate metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps00650 Butanoate metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps00410 beta-Alanine metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00202 Aminotransferase class-III IPR005814 Aminotransferase class-III 24 419 2.8E-125
CDD cd00610 OAT_like IPR005814 Aminotransferase class-III 6 419 3.54758E-145
Gene3D G3DSA:3.90.1150.10 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 7 415 9.0E-156
PIRSF PIRSF000521 IPR005814 Aminotransferase class-III 4 127 1.1E-7
PIRSF PIRSF000521 IPR005814 Aminotransferase class-III 125 422 2.0E-47
TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase IPR004632 4-aminobutyrate aminotransferase, bacterial 9 420 9.8E-192
ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. IPR005814 Aminotransferase class-III 235 272 -
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 23 421 8.81E-133
Gene3D G3DSA:3.40.640.10 IPR015421 Pyridoxal phosphate-dependent transferase, major domain 58 317 9.0E-156

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.