Burkholderia pseudomallei K96243, BPSL3079 (cspD)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003676	nucleic acid binding	ISM Inferred from Sequence Model Term mapped from: InterPro:cd04458	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00050	Cold shock protein signature	IPR002059	Cold-shock protein, DNA-binding	4	19	4.2E-16
SUPERFAMILY	SSF50249		IPR012340	Nucleic acid-binding, OB-fold	1	66	2.36E-25
PRINTS	PR00050	Cold shock protein signature	IPR002059	Cold-shock protein, DNA-binding	25	34	4.2E-16
SMART	SM00357		IPR011129	Cold shock domain	3	67	8.0E-29
PIRSF	PIRSF002599		IPR012156	Cold shock, CspA	1	67	3.1E-26
Gene3D	G3DSA:2.40.50.140				1	65	1.9E-29
PRINTS	PR00050	Cold shock protein signature	IPR002059	Cold-shock protein, DNA-binding	40	58	4.2E-16
ProSiteProfiles	PS51857	Cold-shock (CSD) domain profile.			1	66	36.937
CDD	cd04458	CSP_CDS	IPR002059	Cold-shock protein, DNA-binding	3	66	9.90802E-32
Pfam	PF00313	'Cold-shock' DNA-binding domain	IPR002059	Cold-shock protein, DNA-binding	3	65	5.7E-30
ProSitePatterns	PS00352	Cold-shock (CSD) domain signature.	IPR019844	Cold-shock (CSD) domain	15	34	-

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.