Burkholderia pseudomallei K96243, BPSL2260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006436 tryptophanyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00233
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00233
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00233
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006418 tRNA aminoacylation for protein translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00579
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00579
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004830 tryptophan-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00233
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps00970 Aminoacyl-tRNA biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00970 Aminoacyl-tRNA biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01039 Tryptophanyl-tRNA synthetase signature IPR002306 Tryptophan-tRNA ligase 145 166 1.0E-22
Gene3D G3DSA:3.40.50.620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 1 228 8.3E-77
PRINTS PR01039 Tryptophanyl-tRNA synthetase signature IPR002306 Tryptophan-tRNA ligase 67 86 1.0E-22
Pfam PF00579 tRNA synthetases class I (W and Y) IPR002305 Aminoacyl-tRNA synthetase, class Ic 5 344 6.1E-58
Gene3D G3DSA:1.10.240.10 260 365 5.6E-39
SUPERFAMILY SSF52374 3 397 9.65E-90
ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site 12 21 -
TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase IPR002306 Tryptophan-tRNA ligase 5 176 9.8E-58
PRINTS PR01039 Tryptophanyl-tRNA synthetase signature IPR002306 Tryptophan-tRNA ligase 16 32 1.0E-22
CDD cd00806 TrpRS_core IPR002306 Tryptophan-tRNA ligase 5 351 2.75301E-127
Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. IPR024109 Tryptophan-tRNA ligase, bacterial-type 3 398 35.339

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.