Burkholderia pseudomallei K96243, BPSL1940 (pheT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000287 magnesium ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00472
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004826 phenylalanine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00472
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000049 tRNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01588
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00472
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006432 phenylalanyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00472
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00970 Aminoacyl-tRNA biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps00970 Aminoacyl-tRNA biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46955 IPR009061 Putative DNA-binding domain superfamily 408 479 1.56E-20
SUPERFAMILY SSF54991 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily 704 809 1.09E-20
SMART SM00896 IPR005121 Ferrodoxin-fold anticodon-binding domain 707 809 1.2E-32
ProSiteProfiles PS51483 B5 domain profile. IPR005147 tRNA synthetase, B5-domain 405 480 28.783
Gene3D G3DSA:3.50.40.10 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 204 400 2.4E-71
Pfam PF03483 B3/4 domain IPR005146 B3/B4 tRNA-binding domain 219 391 3.1E-61
ProSiteProfiles PS51447 Ferredoxin-fold anticodon binding (FDX-ACB) domain profile. IPR005121 Ferrodoxin-fold anticodon-binding domain 707 809 25.585
SMART SM00874 IPR005147 tRNA synthetase, B5-domain 407 475 1.2E-30
ProSiteProfiles PS50886 tRNA-binding domain profile. IPR002547 tRNA-binding domain 39 154 40.977
CDD cd02796 tRNA_bind_bactPheRS IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain 45 153 2.27184E-52
SUPERFAMILY SSF56037 202 397 1.31E-67
TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit 1 809 2.2E-232
Pfam PF03147 Ferredoxin-fold anticodon binding domain IPR005121 Ferrodoxin-fold anticodon-binding domain 707 809 1.6E-25
Pfam PF01588 Putative tRNA binding domain IPR002547 tRNA-binding domain 45 151 3.2E-25
Gene3D G3DSA:3.30.930.10 490 698 4.3E-57
SMART SM00873 IPR005146 B3/B4 tRNA-binding domain 218 391 7.5E-81
SUPERFAMILY SSF50249 IPR012340 Nucleic acid-binding, OB-fold 40 201 8.08E-51
Gene3D G3DSA:3.30.56.10 408 480 3.0E-26
Gene3D G3DSA:3.30.70.380 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily 708 809 2.1E-21
SUPERFAMILY SSF55681 471 696 1.99E-49
Pfam PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain 478 691 2.4E-57
Gene3D G3DSA:3.30.56.10 5 188 2.2E-72
Pfam PF03484 tRNA synthetase B5 domain IPR005147 tRNA synthetase, B5-domain 410 475 8.8E-22
CDD cd00769 PheRS_beta_core IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain 501 695 2.39383E-65
Gene3D G3DSA:2.40.50.140 39 160 2.2E-72
Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit 1 803 46.198

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.