Burkholderia pseudomallei K96243, BPSL1527 (tex)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006139 nucleobase-containing compound metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.420.140
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00575
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF12836 Helix-hairpin-helix motif 496 560 1.2E-27
Gene3D G3DSA:1.10.150.310 504 635 1.6E-48
SMART SM00316 IPR022967 RNA-binding domain, S1 654 725 1.4E-24
Gene3D G3DSA:1.10.10.650 IPR023319 Tex-like protein, HTH domain superfamily 3 113 8.7E-43
Gene3D G3DSA:2.40.50.140 636 729 7.7E-28
ProSiteProfiles PS50126 S1 domain profile. IPR003029 S1 domain 656 725 22.766
Pfam PF17674 HHH domain IPR041692 HHH domain 9 566 635 1.9E-22
Gene3D G3DSA:3.30.420.140 IPR037027 YqgF/RNase H-like domain superfamily 329 456 3.4E-156
SUPERFAMILY SSF47781 IPR010994 RuvA domain 2-like 565 637 3.33E-19
Pfam PF09371 Tex-like protein N-terminal domain IPR018974 Tex-like protein, N-terminal 13 196 3.4E-73
SUPERFAMILY SSF53098 IPR012337 Ribonuclease H-like superfamily 326 474 1.29E-48
SUPERFAMILY SSF47781 IPR010994 RuvA domain 2-like 475 563 5.63E-29
Pfam PF00575 S1 RNA binding domain IPR003029 S1 domain 654 725 8.9E-20
CDD cd05685 S1_Tex 656 723 7.38236E-26
SUPERFAMILY SSF158832 6 325 2.35E-121
Gene3D G3DSA:1.10.3500.10 IPR023323 Tex-like domain superfamily 116 502 3.4E-156
SMART SM00732 IPR006641 YqgF/RNase H-like domain 330 429 7.6E-36
Pfam PF16921 Tex protein YqgF-like domain IPR032639 Tex protein, YqgF-like domain 330 456 2.9E-51
SUPERFAMILY SSF50249 IPR012340 Nucleic acid-binding, OB-fold 642 727 1.86E-24
MobiDBLite mobidb-lite consensus disorder prediction 727 774 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.