Burkholderia pseudomallei K96243, BPSL1460 (rpsR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00057
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00057
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00057
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps03010 Ribosome 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01084 Ribosomal protein S18 IPR001648 Ribosomal protein S18 34 83 1.1E-22
Hamap MF_00270 30S ribosomal protein S18 [rpsR]. IPR001648 Ribosomal protein S18 17 88 20.152
PRINTS PR00974 Ribosomal protein S18 family signature IPR001648 Ribosomal protein S18 53 60 3.2E-15
PRINTS PR00974 Ribosomal protein S18 family signature IPR001648 Ribosomal protein S18 75 85 3.2E-15
SUPERFAMILY SSF46911 IPR036870 Ribosomal protein S18 superfamily 14 89 8.24E-28
TIGRFAM TIGR00165 S18: ribosomal protein bS18 IPR001648 Ribosomal protein S18 20 87 3.2E-33
PRINTS PR00974 Ribosomal protein S18 family signature IPR001648 Ribosomal protein S18 43 53 3.2E-15
Gene3D G3DSA:4.10.640.10 IPR036870 Ribosomal protein S18 superfamily 5 90 8.7E-26
PRINTS PR00974 Ribosomal protein S18 family signature IPR001648 Ribosomal protein S18 61 75 3.2E-15
ProSitePatterns PS00057 Ribosomal protein S18 signature. IPR018275 Ribosomal protein S18, conserved site 36 59 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.