Burkholderia pseudomallei K96243, BPSL0125 (sun)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008649 rRNA methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00563
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01153
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01029
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01189
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006364 rRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00563
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.150 261 469 2.2E-54
Gene3D G3DSA:3.30.70.1170 205 260 7.3E-15
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature IPR023267 RNA (C5-cytosine) methyltransferase 396 412 1.7E-25
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature IPR023267 RNA (C5-cytosine) methyltransferase 281 291 1.7E-25
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature IPR023267 RNA (C5-cytosine) methyltransferase 252 266 1.7E-25
Pfam PF01029 NusB family IPR006027 NusB/RsmB/TIM44 55 158 1.1E-5
TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase IPR004573 rRNA small subunit methyltransferase B 38 469 2.0E-86
ProSiteProfiles PS51686 SAM-dependent MTase RsmB/NOP-type domain profile. IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type 196 469 51.006
Gene3D G3DSA:1.10.940.10 IPR035926 NusB-like superfamily 36 175 1.6E-15
Pfam PF01189 16S rRNA methyltransferase RsmB/F IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type 271 466 1.2E-48
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature IPR023267 RNA (C5-cytosine) methyltransferase 346 358 1.7E-25
ProSitePatterns PS01153 NOL1/NOP2/sun family signature. IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site 345 356 -
SUPERFAMILY SSF53335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase 173 469 6.14E-63
SUPERFAMILY SSF48013 IPR035926 NusB-like superfamily 38 181 2.4E-15
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature IPR023267 RNA (C5-cytosine) methyltransferase 451 468 1.7E-25
CDD cd02440 AdoMet_MTases 279 402 2.33754E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.