Burkholderia cenocepacia H111, I35_RS20395 (bceK)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCGGGATCGT-N14-ACGATCCCGC | 863913 | 863946 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGGGATCGT-N14-ACGATCCCGC | 863913 | 863946 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CATCGCGCGACA-N2-TGTCGCGCGATG | 863979 | 864004 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CATCGCGCGACA-N2-TGTCGCGCGATG | 863979 | 864004 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGCGCGCTGCG-N10-CGCAGCGCGCG | 864388 | 864419 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGCGCGCTGCG-N10-CGCAGCGCGCG | 864388 | 864419 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGCGCCGCG-N46-CGCGGCGCGC | 865267 | 865332 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGCGCCGCG-N46-CGCGGCGCGC | 865267 | 865332 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 157 | 865466 | 865493 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Inverted repeat: GCGCGCCGCG-N46-CGCGGCGCGC | 865267 | 865332 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGCGCCGCG-N46-CGCGGCGCGC | 865267 | 865332 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GGCGCGCGTG-N77-CACGCGCGCC | 865440 | 865536 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GGCGCGCGTG-N77-CACGCGCGCC | 865440 | 865536 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |