Burkholderia cenocepacia H111, I35_RS11185 (cueR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00376
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00376
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0045893 positive regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02044
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02044
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005507 copper ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02044
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil 88 108 -
Pfam PF09278 MerR, DNA binding IPR015358 Transcription regulator MerR, DNA binding 44 108 7.7E-20
Gene3D G3DSA:1.10.1660.10 1 125 1.5E-35
ProSitePatterns PS00552 MerR-type HTH domain signature. IPR000551 MerR-type HTH domain 4 26 -
SMART SM00422 IPR000551 MerR-type HTH domain 1 70 4.4E-27
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 13 26 6.7E-11
SUPERFAMILY SSF46955 IPR009061 Putative DNA-binding domain superfamily 1 126 4.4E-37
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 37 57 6.7E-11
Pfam PF00376 MerR family regulatory protein IPR000551 MerR-type HTH domain 2 39 3.6E-15
TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator IPR011789 Cu(I)-responsive transcriptional regulator 1 126 4.4E-52
CDD cd01108 HTH_CueR IPR011789 Cu(I)-responsive transcriptional regulator 1 127 7.63676E-73
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 2 13 6.7E-11
ProSiteProfiles PS50937 MerR-type HTH domain profile. IPR000551 MerR-type HTH domain 1 69 33.252

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.