Burkholderia cenocepacia AU 1054, BCEN_RS15880

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00448	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	164	180	2.0E-12
ProSitePatterns	PS00622	LuxR-type HTH domain signature.	IPR000792	Transcription regulator LuxR, C-terminal	164	191	-
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	180	192	2.0E-12
SUPERFAMILY	SSF52172		IPR011006	CheY-like superfamily	16	156	1.42E-27
CDD	cd06170	LuxR_C_like	IPR000792	Transcription regulator LuxR, C-terminal	150	206	1.30465E-18
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	16	123	4.6E-22
SUPERFAMILY	SSF46894		IPR016032	Signal transduction response regulator, C-terminal effector	139	209	7.82E-20
Pfam	PF00196	Bacterial regulatory proteins, luxR family	IPR000792	Transcription regulator LuxR, C-terminal	149	202	7.5E-22
SMART	SM00421		IPR000792	Transcription regulator LuxR, C-terminal	147	204	3.9E-23
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	150	164	2.0E-12
Gene3D	G3DSA:3.40.50.2300				7	137	1.9E-43
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	140	205	4.0E-19
ProSiteProfiles	PS50043	LuxR-type HTH domain profile.	IPR000792	Transcription regulator LuxR, C-terminal	143	208	30.341
SMART	SM00448		IPR001789	Signal transduction response regulator, receiver domain	12	123	1.0E-17
ProSiteProfiles	PS50110	Response regulatory domain profile.	IPR001789	Signal transduction response regulator, receiver domain	13	127	30.832
CDD	cd00156	REC	IPR001789	Signal transduction response regulator, receiver domain	16	127	8.28892E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.