Burkholderia cenocepacia AU 1054, BCEN_RS14625

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd04784
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0045893 positive regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd04784
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00422
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd04784
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00422
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 37 57 1.7E-9
ProSitePatterns PS00552 MerR-type HTH domain signature. IPR000551 MerR-type HTH domain 4 26 -
ProSiteProfiles PS50937 MerR-type HTH domain profile. IPR000551 MerR-type HTH domain 1 69 36.74
SMART SM00422 IPR000551 MerR-type HTH domain 1 70 3.7E-28
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 13 26 1.7E-9
Pfam PF13411 MerR HTH family regulatory protein IPR000551 MerR-type HTH domain 1 68 3.1E-19
Gene3D G3DSA:1.10.1660.10 1 125 2.3E-34
TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator 1 126 5.6E-53
SUPERFAMILY SSF46955 IPR009061 Putative DNA-binding domain superfamily 1 126 1.28E-33
Coils Coil 91 111 -
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 2 13 1.7E-9
CDD cd04784 HTH_CadR-PbrR IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 8.90834E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.