Burkholderia cenocepacia AU 1054, BCEN_RS14520

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004375 glycine dehydrogenase (decarboxylating) activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02347
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02347
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.640.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006546 glycine catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02347
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006544 glycine metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00461
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00260 Glycine, serine and threonine metabolism InterPro 5.25-64.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00260 Glycine, serine and threonine metabolism InterPro 5.25-64.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00260 Glycine, serine and threonine metabolism InterPro 5.25-64.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00260 Glycine, serine and threonine metabolism InterPro 5.25-64.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00260 Glycine, serine and threonine metabolism InterPro 5.25-64.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00260 Glycine, serine and threonine metabolism InterPro 5.25-64.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00613 GDC-P IPR020581 Glycine cleavage system P protein 500 890 1.74022E-149
Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. IPR003437 Glycine dehydrogenase (decarboxylating) 20 974 25.882
CDD cd00613 GDC-P IPR020581 Glycine cleavage system P protein 91 454 8.72876E-146
Gene3D G3DSA:3.90.1150.10 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 790 923 6.5E-45
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 29 457 5.72E-103
Gene3D G3DSA:3.90.1150.10 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 356 459 1.0E-26
Gene3D G3DSA:3.40.640.10 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 543 789 3.1E-38
TIGRFAM TIGR00461 gcvP: glycine dehydrogenase IPR003437 Glycine dehydrogenase (decarboxylating) 29 968 0.0
Pfam PF02347 Glycine cleavage system P-protein IPR020581 Glycine cleavage system P protein 492 761 7.3E-11
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 947 969 1.63E-100
Gene3D G3DSA:3.40.640.10 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 110 355 3.2E-36
Pfam PF02347 Glycine cleavage system P-protein IPR020581 Glycine cleavage system P protein 28 454 1.3E-178
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 496 904 1.63E-100

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.