Burkholderia cenocepacia AU 1054, BCEN_RS13970

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00039	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00039	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	18	29	3.8E-7
Gene3D	G3DSA:3.40.190.10				90	273	8.7E-30
Pfam	PF03466	LysR substrate binding domain	IPR005119	LysR, substrate-binding	86	293	3.7E-35
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	1	105	2.57E-20
Pfam	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	IPR000847	Transcription regulator HTH, LysR	4	62	1.4E-19
Gene3D	G3DSA:3.40.190.10				166	268	8.7E-30
CDD	cd05466	PBP2_LTTR_substrate			91	285	4.81616E-27
SUPERFAMILY	SSF53850				87	297	2.65E-34
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	29	39	3.8E-7
ProSiteProfiles	PS50931	LysR-type HTH domain profile.	IPR000847	Transcription regulator HTH, LysR	1	58	30.486
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	39	50	3.8E-7
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	1	87	7.5E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.