Burkholderia cenocepacia AU 1054, BCEN_RS12945 (prfA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016149 translation release factor activity, codon specific
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00093
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003747 translation release factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00472
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006415 translational termination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00937
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil 2 29 -
Pfam PF03462 PCRF domain IPR005139 Peptide chain release factor 13 203 9.1E-71
Pfam PF00472 RF-1 domain IPR000352 Peptide chain release factor class I 214 321 3.6E-42
ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. IPR000352 Peptide chain release factor class I 228 244 -
Gene3D G3DSA:3.30.160.20 210 297 1.5E-97
Gene3D G3DSA:3.30.70.1660 112 341 1.5E-97
Coils Coil 75 95 -
SUPERFAMILY SSF75620 12 353 4.19E-135
TIGRFAM TIGR00019 prfA: peptide chain release factor 1 IPR004373 Peptide chain release factor 1 1 356 1.3E-162
Hamap MF_00093 Peptide chain release factor 1 [prfA]. IPR004373 Peptide chain release factor 1 5 357 40.841
SMART SM00937 IPR005139 Peptide chain release factor 63 178 8.6E-65

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.