Burkholderia cenocepacia AU 1054, BCEN_RS12870 (ychF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005525 GTP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00944
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01926 50S ribosome-binding GTPase IPR006073 GTP binding domain 5 116 1.5E-22
Pfam PF06071 Protein of unknown function (DUF933) IPR013029 YchF, C-terminal domain 280 363 1.4E-38
SUPERFAMILY SSF81271 IPR012676 TGS-like 280 360 3.27E-35
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 3 302 2.32E-86
PRINTS PR00326 GTP1/OBG GTP-binding protein family signature IPR006073 GTP binding domain 5 25 5.5E-34
PRINTS PR00326 GTP1/OBG GTP-binding protein family signature IPR006073 GTP binding domain 26 44 5.5E-34
PRINTS PR00326 GTP1/OBG GTP-binding protein family signature IPR006073 GTP binding domain 70 85 5.5E-34
Gene3D G3DSA:3.40.50.300 3 279 1.5E-151
Gene3D G3DSA:3.10.20.30 IPR012675 Beta-grasp domain superfamily 48 362 1.5E-151
Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 2 364 44.741
Gene3D G3DSA:1.10.150.300 IPR023192 TGS-like domain superfamily 113 201 1.5E-151
CDD cd01900 YchF IPR041706 YchF, N-terminal 5 278 8.35635E-171
TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 1 364 1.1E-155
ProSiteProfiles PS51710 OBG-type guanine nucleotide-binding (G) domain profile. IPR031167 OBG-type guanine nucleotide-binding (G) domain 3 257 55.413
CDD cd04867 TGS_YchF_OLA1 IPR013029 YchF, C-terminal domain 278 362 6.11168E-54
PRINTS PR00326 GTP1/OBG GTP-binding protein family signature IPR006073 GTP binding domain 87 105 5.5E-34
PIRSF PIRSF006641 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 1 364 6.4E-157

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.