Burkholderia cenocepacia AU 1054, BCEN_RS12385

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 220 295 2.3E-18
Pfam PF06719 AraC-type transcriptional regulator N-terminus IPR009594 Transcription regulator HTH, AraC, N-terminal 36 185 4.0E-46
Gene3D G3DSA:1.10.10.60 193 301 2.7E-23
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 251 298 2.82E-8
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 201 299 24.319
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 197 248 2.9E-9
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 214 297 8.5E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.