Burkholderia cenocepacia AU 1054, BCEN_RS11020

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF89550
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006260 DNA replication
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07733
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008408 3'-5' exonuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07733
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003887 DNA-directed DNA polymerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01902
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF89550 IPR016195 Polymerase/histidinol phosphatase-like 18 81 3.14E-7
Gene3D G3DSA:3.20.20.140 9 279 9.2E-49
Coils Coil 869 889 -
CDD cd04485 DnaE_OBF 982 1059 6.18977E-15
Pfam PF02811 PHP domain IPR004013 PHP domain 16 127 1.6E-14
Pfam PF17657 Bacterial DNA polymerase III alpha subunit finger domain IPR040982 DNA polymerase III alpha subunit finger domain 558 733 7.0E-56
Pfam PF14579 Helix-hairpin-helix motif IPR029460 DNA polymerase, helix-hairpin-helix motif 808 902 2.1E-23
SMART SM00481 IPR003141 Polymerase/histidinol phosphatase, N-terminal 12 79 1.2E-13
CDD cd07434 PHP_PolIIIA_DnaE2 11 288 4.91144E-108
Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. IPR023073 DNA polymerase, error-prone 11 1071 13.473
TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit IPR004805 DNA polymerase III, alpha subunit 12 1014 2.0E-159
Pfam PF07733 Bacterial DNA polymerase III alpha NTPase domain IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain 301 555 3.0E-79

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.