Burkholderia cenocepacia AU 1054, BCEN_RS10185

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 220 267 8.96E-8
SUPERFAMILY SSF52317 IPR029062 Class I glutamine amidotransferase-like 6 201 6.39E-51
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 223 321 25.235
Gene3D G3DSA:3.40.50.880 IPR029062 Class I glutamine amidotransferase-like 3 210 4.1E-66
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 242 321 1.4E-18
CDD cd03137 GATase1_AraC_1 9 199 1.08653E-87
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 236 319 2.8E-20
Gene3D G3DSA:1.10.10.60 219 323 7.1E-25
Pfam PF01965 DJ-1/PfpI family IPR002818 DJ-1/PfpI 8 182 1.2E-25
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 272 322 1.59E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.