Burkholderia cenocepacia AU 1054, BCEN_RS05300

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015276 ligand-gated ion channel activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 36 255 6.9E-71
ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. IPR018313 Solute-binding protein family 3, conserved site 61 74 -
CDD cd13712 PBP2_FliY 38 256 1.69671E-127
SUPERFAMILY SSF53850 8 258 1.37E-72
SMART SM00062 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 38 258 3.9E-81
Gene3D G3DSA:3.40.190.10 122 220 6.9E-71
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 39 256 4.0E-67
SMART SM00079 IPR001320 Ionotropic glutamate receptor 38 257 0.0031

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.