Burkholderia cenocepacia AU 1054, BCEN_RS05040

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00529
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00529
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00529
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00529 HlyD membrane-fusion protein of T1SS IPR006143 RND efflux pump, membrane fusion protein 288 343 2.1E-15
Gene3D G3DSA:1.10.287.470 119 185 4.8E-6
Coils Coil 158 178 -
SUPERFAMILY SSF111369 58 111 4.18E-8
Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain 58 287 3.0E-14
SUPERFAMILY SSF111369 178 265 7.72E-5
Gene3D G3DSA:2.40.50.100 58 115 2.3E-10
SUPERFAMILY SSF111369 118 180 9.68E-5
Gene3D G3DSA:2.40.30.170 229 351 7.1E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.