Burkholderia cenocepacia AU 1054, BCEN_RS05005

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009451 RNA modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01149
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0001522 pseudouridine synthesis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01149
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009982 pseudouridine synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00849
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016866 intramolecular transferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01149
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01149
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00849 RNA pseudouridylate synthase IPR006145 Pseudouridine synthase, RsuA/RluA 248 381 1.9E-13
Pfam PF01479 S4 domain IPR002942 RNA-binding S4 domain 187 229 9.6E-9
Gene3D G3DSA:3.10.290.10 IPR036986 RNA-binding S4 domain superfamily 180 240 1.3E-20
ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site 286 300 -
SUPERFAMILY SSF55174 187 278 1.57E-16
ProSiteProfiles PS50889 S4 RNA-binding domain profile. IPR002942 RNA-binding S4 domain 185 254 12.361
MobiDBLite mobidb-lite consensus disorder prediction 503 586 -
CDD cd00165 S4 IPR002942 RNA-binding S4 domain 187 252 1.81787E-11
SMART SM00363 IPR002942 RNA-binding S4 domain 185 245 5.9E-9
Gene3D G3DSA:3.30.70.580 250 408 1.9E-45
SUPERFAMILY SSF55120 IPR020103 Pseudouridine synthase, catalytic domain superfamily 246 417 2.4E-40
MobiDBLite mobidb-lite consensus disorder prediction 1 134 -
MobiDBLite mobidb-lite consensus disorder prediction 89 103 -
TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase IPR000748 Pseudouridine synthase, RsuA/RluB/E/F 252 412 9.4E-50
CDD cd02556 PseudoU_synth_RluB 247 412 2.3397E-84
MobiDBLite mobidb-lite consensus disorder prediction 422 479 -
Gene3D G3DSA:3.30.70.1560 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain 310 400 1.9E-45

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.