| Internal ID | 1989799 | Source Database | TransTermHP TERM 339 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 339
|
| Sequence |
CGCGCGAGCGGGATGAACAGCCGCATGGCGGCCGGGCGTCCCGCTCGCCG Look for more occurrences |
| Start | 1689738 |
| End | 1689787 |
| Strand | + |
| Genomic Context | |
| Replicon | Burkholderia mallei ATCC 23344 chromosome 2, complete sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GCCAGTTCGGCGGCG(5' tail) CGCGCGAGCGGGATGAACAGCCGC(5' stem) ATG(loop) GCGGCCGGGCGTCCCGCTCGC-CG(3' stem) GTTTGTTGGTTCGCC(3' tail). Confidence: 100. gap 1, opp_overlap 1689755, overlap 1689738 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|