Motif View

Internal ID 1979746
Source Database TransTermHP TERM 394
Feature Type terminator
Name
Rho-independent transcription terminator TERM 394
Sequence GCCGGCCGCCCGATCCGGGCGAGCCGGC
Look for more occurrences
Start 1658779
End 1658806
Strand -
Genomic Context
Replicon Burkholderia dolosa AU0158 chromosome 2, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGACGACGAAAAAAA(5' tail) GCCGGCTCGCCCG(5' stem) GAT(loop) CGGGCG-GCCGGC(3' stem) TCGCGAACCGGCCGC(3' tail). Confidence: 100. gap 1

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685