| Internal ID | 1838788 | Source Database | TransTermHP TERM 139 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 139
|
| Sequence |
CCGCCGCGCGGCGCAACGCGCACGCAGGCGCGTTCGCGCGTTGCCCGCCCATTAG Look for more occurrences |
| Start | 965027 |
| End | 965081 |
| Strand | - |
| Genomic Context | |
| Replicon | Burkholderia multivorans strain DDS 15A-1 chromosome 3, complete sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GAGCAGAAAGAAAAA(5' tail) CTAATGGGCGG-GCAACGCGCGAACGC(5' stem) GCCT(loop) GCGT--GCGCGTTGCGCCGCGCGGCGG(3' stem) CCTGTCATGCCTGCG(3' tail). Confidence: 100. gap 3, opp_overlap 965069, overlap 965031 965032 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|