Motif View

Internal ID 1787588
Source Database TransTermHP TERM 223
Feature Type terminator
Name
Rho-independent transcription terminator TERM 223
Sequence GCCCTCGCGCGGCGTCTCGCCGCGCGGGGGC
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Start 1032507
End 1032537
Strand -
Genomic Context
Replicon Burkholderia cenocepacia H111 chromosome 2, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCGGCCGTGAAAAA(5' tail) GCCCCCGCGCGGCG(5' stem) AGA(loop) CGCCGCGCGAGGGC(3' stem) CGCGAAACCGGACGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685