Motif View

Internal ID 1787517
Source Database TransTermHP TERM 95
Feature Type terminator
Name
Rho-independent transcription terminator TERM 95
Sequence GGCGCCGCCGACGGCCGGCGGCGCC
Look for more occurrences
Start 546999
End 547023
Strand -
Genomic Context
Replicon Burkholderia cenocepacia H111 chromosome 2, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGTCGTTCCGGACAA(5' tail) GGCGCCGCCG(5' stem) GCCGT(loop) CGGCGGCGCC(3' stem) CGTCGCATTACACCG(3' tail). Confidence: 100. opp_overlap 547017

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685