Motif View

Internal ID 1787448
Source Database TransTermHP TERM 1267
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1267
Sequence CCCCAAGAATCGGAAGGTTCTTGGGG
Look for more occurrences
Start 3439838
End 3439863
Strand -
Genomic Context
Replicon Burkholderia cenocepacia H111 chromosome 1 complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCACAAACGAAAAA(5' tail) CCCCAAGAACC(5' stem) TTCC(loop) GATTCTTGGGG(3' stem) TTTTAAATGCTGGTG(3' tail). Confidence: 100. opp_overlap 3439838

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685