Motif View

Internal ID 1786660
Source Database TransTermHP TERM 144
Feature Type terminator
Name
Rho-independent transcription terminator TERM 144
Sequence CGGCAACGGGGCGCTTGGCGTCCCGTTGCCG
Look for more occurrences
Start 354486
End 354516
Strand +
Genomic Context
Replicon Burkholderia cenocepacia H111 chromosome 1 complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTCTAAGGTCGGTTG(5' tail) CGGCAACGGGGCGC(5' stem) TTG(loop) GCGTCCCGTTGCCG(3' stem) TTTTCGCTGTCAACA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685