| Internal ID | 1764576 | Source Database | TransTermHP TERM 42 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 42
|
| Sequence |
GACAAGGGCCGGTTGCCGCGAAAGCGGTAACCGGCCCTTGTC Look for more occurrences |
| Start | 131949 |
| End | 131990 |
| Strand | + |
| Genomic Context | |
| Replicon | Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CTTCGACGGTCGAAT(5' tail) GACAAGGGCCGGTTGCCGC(5' stem) GAAA(loop) GCGGTAACCGGCCCTTGTC(3' stem) GTTGTGCGCCCAGCA(3' tail). Confidence: 100. opp_overlap 131951 131954 131972, overlap 131948 131954 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|